grapevine flower sex locus Fechter et al revised2 supplementary

Transcription

Candidate genes within a 143 kb region of the flower sex locus in Vitis
Molecular Genetics and Genomics
Iris Fechter*, Ludger Hausmann, Margrit Daum, Thomas Rosleff Sörensen, Prisca Viehöver, Bernd Weisshaar,
Reinhard Töpfer
*Corresponding author: [email protected]; Tel.: +49-6345-41120; FAX: +49-6345-41179
Julius Kühn-Institut – Federal Research Centre for Cultivated Plants, Institute for Grapevine Breeding
Geilweilerhof, 76833 Siebeldingen, Germany
Table S1: Flower sex and predicted allele combination in selected cultivars and wild Vitis species using the
APT intron 2 marker. F = female; H = hermaphrodite; M = male flower sex alleles, respectively. Sizes of
the female allele differ in cultivars (268 and 397 bp) and wild Vitis species (336 bp). The presence of the
latter is thus indicated in the comments. Prime names are used according to Vitis International Variety
Catalogue (www.vivc.de).
Cultivars
genotype
flower sex
marker results comments
‘Abiorgitiko’
H
HF
‘Abjosh’
F
FF
‘Abla Aganyn Isyum’
H
HF
‘Affenthaler’
H
HF
‘Afus Ali’
H
HF
‘Agadai’
H
HF
‘Aitonychi Aspro’
H
HF
‘Al Burla’
H
HF
‘Albillo’
H
HF
‘Alimshak’
H
HF
‘Alphonse Lavallee’
H
HH
‘Ararati’
H
HF
‘Areni Chernyi’
H
HF
‘Argant’
H
HF
‘Arvine Petite’
H
HF
‘Asma’
H
HF
‘Asma Sohwars’
H
HF
‘Aspirant’
H
HF
‘Aspro’
H
HF
‘Assyrtico’
H
HF
‘Athiri Aspro’
H
HF
‘Augster Weiß’
F
FF
‘Auxerrois’
H
HF
‘Babeasca Neagra’
H
HF
‘Babic’
H
HF
‘Bakator Roz’
F
FF
‘Bayan Shirei’
H
HH
‘Beitamouni’
H
HF
‘Bena’
H
HF
‘Bermestia Bianca’
F
FF
H
HF
Not true to type
Not true to type
H
HF
‘Beylerce’
H
HF
‘Bias Kukuzeti’
H
HF
‘Bicane’
F
FF
‘Bidaneh Safid’
H
HF
‘Blatina’
H
HF
‘Blaufraenkisch’
H
HF
wild F allele
‘Börner’
M
MF
wild F allele
‘Brachetto’
H
HF
‘Braghina’
F
FF
‘Cabernet Franc’
H
HF
‘Cabernet Sauvignon’
H
HF
‘Calitor Noir’
H
HF
‘Canaiolo Nero’
H
HF
‘Carcajolo Nero’
H
HF
‘Carignan Noir’
H
HF
‘Chambourcin’
H
HF
‘Chancellor’
H
HF
‘Chaouch Blanc’
F
FF
‘Chardonnay Blanc’
H
HF
‘Chasselas Blanc’
H
HF
‘Chirai’
H
HF
‘Cinsaut’
H
HF
‘Cioninic’
F
FF
‘Coarna Alba’
F
FF
‘Coarna Neagra’
F
FF
‘Coarna Rosie’
F
FF
‘Concord’
H
HF
‘Cornichon Blanc’
H
HF
‘Crimposie’
F
FF
‘Cyperntraube’
F
FF
‘Dardagan’
H
HF
‘Demir Kara’
H
HF
‘Diana’
H
HF
‘Dimiski’
H
HH
‘Dimyat’
H
HF
‘Drenak Crven’
F
FF
‘Dzhidzhigi Kara’
H
HF
‘Elbling Weiss’
H
HF
‘Ezerjo’
H
HF
wild F allele
wild F allele
wild F allele
‘Faberrebe’
H
HF
‘Folle Blanche’
H
HF
Ga4742
H
HF
‘Galbena Uriasa’
H
HF
‘Garganega’
H
HF
‘Geisdutte Blau’
F
FF
‘Gelbhoelzer Blau’
H
HF
‘Gordin’
H
HF
‘Gouliaby’
H
HF
‘Graciano’
H
HF
‘Grec Rose’
H
HF
‘Grignolino’
H
HF
‘Haci Tespihi’
H
HF
‘Hago Ali Negru’
H
HF
‘Harslevelue’
H
HH
‘Heroldrebe’
H
HH
‘Heunisch Weiss’
H
HF
‘Honigler’
H
HF
‘Hoertling Weiss’
F
FF
‘Isabella’
H
HF
‘Javor Weiss’
F
FF
‘Kadarka Kek’
H
HF
‘Kakourdess Biely’
H
HF
‘Kandahari Safid’
H
HF
‘Kandahari Siah’
F
FF
‘Kandavasta’
H
HF
‘Katta Kurgan’
F
FF
‘Kharistvala Kolkhuri’
H
HF
‘Khindogny’
H
HF
‘Kirmizi Sap Sudakskii’
F
FF
wild F allele
wild F allele
wild F allele
‘Knipperle’
H
HF
‘Kober 125 A’
M
MF
wild F allele
‘Kober 5 Bb’
F
FF
wild F allele
‘Koenigstraube’
F
FF
‘Korinthiaki’
H
HF
‘Kornishon Krymskii’
F
FF
‘Kreaca’
H
HF
‘Limnio’
H
HF
‘Madeleine Angevine’
F
FF
‘Malvasia Bianca’
F
FF
‘Malvasia Del Chianti’
H
HF
‘Maras Bjal’
H
HF
‘Mavrodaphni’
H
HF
‘Millardet Et Grasset 420 A’
M
MH
‘Monastrell’
H
HF
‘Montepulciano’
H
HF
‘Moscato Rosa’
F
FF
‘Mueller Thurgau’
H
HF
‘Muscat A Petits Grains Blancs’
H
HF
‘Muscat A Petits Grains Rouges’
H
HF
‘Muscat Hamburg’
H
HH
‘Muskat Of Alexandria’
H
HF
‘Narince’
H
HF
‘Nebbiolo’
H
HF
‘Negrara Trentina’
H
HF
‘Negru Aromat’
H
HH
‘Negru De Causani’
F
FF
‘Negru Moale’
H
HF
‘Negru Virtos’
F
FF
‘Nimrang’
F
FF
‘Nincusa’
H
HF
‘Oesterreichisch Weiss’
H
HF
‘Olivette Blanche’
F
FF
‘Palestina I’
F
FF
‘Palomino Fino’
H
HF
‘Pamid’
H
HF
‘Parkent’
H
HF
‘Pedro Ximenes’
H
HF
‘Portugieser Blau’
H
HF
‘Primitivo’
H
HF
‘Prokupac’
H
HF
‘Putzscheere’
H
HF
‘Rasheh’
H
HF
‘Razaki’
H
HF
‘Regent’
H
HF
‘Riesling weiss’
H
HF
‘Rish Baba’
H
HF
‘Rkatsiteli’
H
HF
‘Romeiko’
H
HF
‘Rufete’
H
HF
‘Rumi Ahmar’
H
HF
‘Sangiovese’
H
HH
‘Saperavi’
H
HF
‘Savvatiano’
H
HF
‘Schiava Grossa’
H
HF
‘Semillon’
H
HF
‘Shindukhani’
H
HF
‘Shiradzouli Belyi’
H
HF
‘Shiradzouli Violet’
H
HH
‘Shiraz’
H
HF
‘Shtur Angur’
H
HF
‘Silvaner Gruen’
H
HF
wild F allele
wild F allele
wild F allele
‘Slankamenka Bela’
H
HF
‘Selektion Oppenheim 4’
H
HF
‘Stanusina Crna’
H
HF
‘Stolle 502’
F
FF
‘Sultanina 11/2’
H
HF
‘Tagobi’
F
FF
‘Taifi Rozovyi’
H
HF
‘Tashli’
F
FF
‘Tauberschwarz’
H
HF
‘Tavkveri’
F
FF
‘Teinturier’
H
HF
‘Teleki 5 A’
M
MF
wild F allele
‘Teleki 5 C’
M
MF
wild F allele
‘Teleki 8 B’
M
MF
wild F allele
‘Tempranillo’
H
HF
‘Terbash’
H
HF
‘Teroldego’
H
HF
‘Tinto Cao’
H
HF
‘Tocai Friulano’
H
HF
‘Tolstokoryi’
H
HF
‘Tressot Panache’
H
HF
‘Trincadeira Preta’
H
HF
‘Tsimlyanskii Chernyi’
H
HF
‘Tsitsa Kaprei’
H
HF
‘Uva Di Troia’
H
HH
V.Caucasica Vavilov Cl. 6-2-6
H
HF
V3125
H
HH
‘Verdelho Do Dao’
H
HF
‘Verdot Petit’
H
HF
‘Vermentino’
H
HF
‘Villard Blanc’
H
HF
‘Viura’
H
HF
‘Vranac’
H
HF
‘Vugava’
H
HF
‘Welschriesling’
H
HF
‘Xarello’
H
HF
‘Xynomavro’
H
HF
‘Yapincak’
H
HF
‘Yuvarlak Maras’
H
HF
‘Zante Rouge’
H
HH
‘Zheludevyi’
H
HF
‘Zilavka’
H
HF
‘Zimmettraube’
F
FF
‘Zimsko Belo’
H
HF
‘Zlatarica’
H
HF
wild F allele
wild F allele
wild F allele
wild F allele
Exceptions / Traminer and Pinot
Genotype
flower sex
‘Traminer Weiss’
H
Fx
H/M allele missing
‘Pinot Blanc’
H
Fx
*
‘Pinot Gris’
H
Fx
*
‘Pinot Meunier’
H
Fx
*
‘Pinot Noir’
H
Fx
PN40024
H
Fx
*
‘Chenin Blanc’
H
Fx
*
‘Donzelinho Branco’
H
Fx
*
‘Donzelinho Tinto’
H
Fx
*
‘Gamay Noir’
H
Fx
Pinot offspring
‘Manseng Petit Blanc’
H
Fx
*
‘Melon’
H
Fx
Pinot offspring
‘Saint Laurent’
H
Fx
Pinot offspring
‘Sauvignon Blanc’
H
Fx
*
‘Veltliner Gruen’
H
Fx
*
*shares 1/2 of the alleles with Traminer
V. sylvestris
Genotype
V. sylvestris Dalaman 54-64
flower sex
F
FF
V. sylvestris Dirmstein
F
FF
V. sylvestris Dirmstein 2
F
FF
V. sylvestris Fethiye 56-64
M
MF
M
MF
M
MF
V. sylvestris Gümüldür 94-64
M
MF
M
MF
F
FF
F
FF
M
MF
F
FF
V. sylvestris Ketsch
M
MF
V. sylvestris Ketsch
F
FF
V. sylvestris Ketsch 2-39
M
MF
V. sylvestris Ketsch 6
M
MF
V. sylvestris Ketsch 6-4N
M
MF
V. sylvestris Ketsch 6-40
M
MF
V. sylvestris Ketsch 6-40 (4N)
F
FF
F
FF
F
FF
V. sylvestris Ketsch 27 (4N)
F
FF
M
MF
F
FF
V. sylvestris Kollerinsel 1-36
M
MF
V. sylvestris Kollerinsel 9-5-21
M
MF
V. sylvestris Neustadt 6-4-19
M
MF
V. sylvestris Oberlin 21
M
MF
V. sylvestris Ula 51-64
F
FF
American / Asian Vitis species
Genotype
flower sex
V. aestivalis 15-22-22
M
MF
wild F allele
F
FF
wild F allele
F
FF
wild F allele
F
FF
wild F allele
M
MF
wild F allele
M
MF
wild F allele
F
FF
wild F allele
M
MF
wild F allele
M
MF
wild F allele
M
MF
wild F allele
F
FF
wild F allele
M
MF
wild F allele
F
FF
wild F allele
V. amurensis 26-03-15
F
FF
wild F allele
F
FF
wild F allele
F
FF
wild F allele
M
MF
cultured F allele
F
FF
wild F allele
F
FF
both F alleles
F
FF
wild F allele
F
FF
cultured F allele
M
MF
cultured F allele
M
MF
cultured F allele
M
MF
cultured F allele
F
FF
both F alleles
F
FF
wild F allele
F
FF
wild F allele
F
FF
both F alleles
V. cinerea 31-13-82
F
FF
wild F allele
V. cinerea 31-13-85
F
FF
wild F allele
V. cinerea 31-13-87
F
FF
wild F allele
V. cinerea 31-13-88
F
FF
wild F allele
V. cinerea 31-14-01
M
MF
wild F allele
V. cinerea 31-14-03
F
FF
wild F allele
V. cinerea 31-14-04
M
MF
wild F allele
V. cinerea 31-14-05
M
MF
wild F allele
V. cinerea 31-14-06
F
FF
wild F allele
V. cinerea 31-14-10
M
MF
wild F allele
V. cinerea 31-14-11
M
MF
wild F allele
V. cinerea 31-14-17
F
FF
wild F allele
V. cinerea 31-14-19
M
MF
wild F allele
V. cinerea 31-14-20
M
MF
wild F allele
V. cinerea 31-14-22
M
MF
wild F allele
V. cinerea Arnold
M
MF
wild F allele
V. rupestris 26-15-28
F
FF
wild F allele
M
MF
wild F allele
M
MF
wild F allele
F
FF
wild F allele
M
MF
wild F allele
F
FF
wild F allele
M
MF
wild F allele
V. rupestris Du Lot
M
MF
wild F allele
V. rupestris _Ru66_12
M
MF
wild F allele
F
FF
wild F allele
V. rupestris Scheele
F
FF
wild F allele
V. vulpina 31-14-53
F
FF
wild F allele
V. vulpina 15-25-07
M
MF
wild F allele
V. vulpina 15-25-08
M
MF
wild F allele
V. vulpina 15-25-18
F
FF
wild F allele
V. vulpina 26-10-01
M
MF
wild F allele
V. vulpina 26-10-06
F
FF
wild F allele
V.riparia Gloire de Montpellier
M
MF
wild F allele
V.riparia Gm183
F
FF
wild F allele
V.riparia 76-49-01
F
FF
wild F allele
V.riparia RA-66-3
M
MF
wild F allele
V. monticola
F
FF
wild F allele
Seedlings Riesling x V. riparia
Genotype
flower sex
RxR 1
F
FF
wild F allele
RxR 2
M
MF
wild F allele
RxR 3
H
HF
wild F allele
RxR 4
F
FF
wild F allele
RxR 5
H
HF
wild F allele
RxR 6
M
MF
wild F allele
RxR 7
M
MF
wild F allele
RxR 8
M
MF
wild F allele
RxR 9
M
MH
RxR 10
F
FF
RxR 11
M
MH
RxR 12
H
HF
wild F allele
RxR 13
H
HF
wild F allele
RxR 14
M
MF
wild F allele
RxR 15
H
HF
wild F allele
wild F allele
RxR 16
F
FF
wild F allele
RxR 17
F
FF
wild F allele
RxR 18
F
FF
wild F allele
RxR 19
F
FF
wild F allele
RxR 20
M
MF
wild F allele
RxR 21
H
HF
wild F allele
RxR 22
H
HF
wild F allele
RxR 23
M
MF
wild F allele
RxR 24
F
FF
wild F allele
RxR 25
H
HF
wild F allele
RxR 26
M
MF
wild F allele
RxR 27
H
HF
wild F allele
RxR 28
F
FF
wild F allele
RxR 29
M
MF
wild F allele
RxR 30
F
FF
wild F allele
RxR 31
H
HF
wild F allele
RxR 32
F
FF
wild F allele
RxR 33
H
HF
wild F allele
RxR 34
F
FF
wild F allele
RxR 35
M
MH
RxR 36
F
FF
wild F allele
RxR 37
M
MF
wild F allele
RxR 38
M
MF
wild F allele
RxR 39
F
FF
wild F allele
RxR 40
M
MF
wild F allele
RxR 41
M
MF
wild F allele
RxR 42
F
FF
wild F allele
RxR 43
F
FF
wild F allele
RxR 44
F
FF
wild F allele

grapevine flower sex locus Fechter et al revised2 supplementary

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