Curriculum Vitæ - Center for Magnetic Resonance in Biology and

Curriculum Vitæ - Center for Magnetic Resonance in Biology and

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Curriculum Vitæ
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written on February 25th, 2013
CRMBM-CEMEREM UMR 7339
Name
Date of birth
Family situation
Nationality
Address
Phone
Email
Web
Arnaud Le Troter
November 14th, 1978 in Aix en Pce (France)
Married, two children
French
Faculté de Médecine 27 Boulevard Jean Moulin,
13385 Marseille Cedex 05
CEMEREM : +33 491 388 465
CRMBM: +33 491 324 813
[email protected]
http://arnaud.le-troter.perso.esil.univmed.fr
Current Position
CNRS research engineer (IR2)
Centre de Résonance Magnétique Biologique et Médicale, UMR CNRS 7339
PhD Thesis
I obtained in 2006 my Ph.D. degree at the Systems and Information Engineering Laboratory (LSIS lab) from
the University of Aix-Marseille-2.
Title : « Images and Models registration : application to 3D reconstruction of sports scenes videos »
Current Research Interest
My research field is related to algorithmics, pattern recognition and image segmentation and registration for
medical applications, in particular human brain data analysis. From 2006 to 2011, I was a research engineer
in LSIS and has recently participated in the BrainMorph project, funded by the french ‘Agence nationale de la
Recherche’, dedicated to the development and validation of surface-based brain morphometrics methods. I
developed the software tools necessary to use these methods, mostly within the BrainVisa software platform,
in C++ and python programming languages.
Since 2012, I am CNRS research engineer (IR2) in the CRMBM Lab, and works in the research field of the
functional organization of brain networks, muscle and spinal cord segmentation.
Current projects
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Brain segmentation : Development of sulcal line extraction on human brain surface for parameterization
of the cortical surface
Muscle segmentation : Development of fully automatic segmentation method of muscle MR images that
aimed at discriminating the subcutaneous adipose tissue and the intramuscular adipose tissue
Spinal Cord segmentation : Creating multi-modal and probabilistic atlas of the spinal cord for automatic
pipeline segmentation.
Key Words and pictures
Image segmentation and registration, sulcal lines extraction, applied mathematics
Publications
Journals / Book chapters
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G Auzias, J Lefevre, A Le Troter, C Fisher, M Perrot, J Regis, O Coulon, "Model-driven Harmonic Parameterization
of the Cortical Surface: HIP-HOP", in IEEE TMI 2013, in press
Arnaud LE TROTER, Guillaume AUZIAS, Olivier COULON "Automatic Sulcal Line Extraction on Cortical Surfaces
Using Geodesic Path Density Maps" , in : Neuroimage, Vol. 61, pp. 941-949, mai 2012
Gloria MENEGAZ, Arnaud LE TROTER, Jean SEQUEIRA, Jean-marc BOÏ "A discrete model for color naming", in :
"EURASIP Journal on Applied Signal Processing", juin 2006
International Conferences with peer review and proceedings
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Yanal WAZAEFI, Yvane BRUNEU, Julien LEFEVRE, Gloria MENEGAZ, Giullia PAGGETTI, Arnaud LE TROTER,
Sébastien PARIS,Jean-jacques GROB , Bernard FERTIL "Consensus clustering from experts’ partitions for patients’
nevi: Model the Ugly Duckling" , WORLDCOMP, Las Vegas, Nevada, USA, 16 jui 2012 au 19 jui 2012
OPERTO Grégory, Guillaume AUZIAS, Arnaud LE TROTER, Matthieu PERROT, Denis RIVIÈRE, Jessica
DUBOIS, Petra HÜPPI, Olivier COULON, Jean-francois MANGIN "Structural Group Analysis of Cortical Curvature
and Depth Patterns in the Developing Brain" , ISBI 2012, IEEE, 2012
Guillaume AUZIAS, Julien LEFEVRE, Arnaud LE TROTER, Clara FISCHER, Matthieu PERROT, Jean RÉGIS,
Olivier COULON "Model-Driven Harmonic Parameterization of the Cortical Surface" , in : Springer-Verlag, 14th
International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2011, Vol.
6893, pp. 310-317, LNCS, Toronto, Canada, 18 sep 2011 au 22 sep 2011
Arnaud LE TROTER, Guillaume AUZIAS, Olivier COULON "Automatic extraction of sulcal lines on the cortical
surface using shortest path probability maps" , 33rd Annual International Conference of the IEEE Engineering in
Medicine and Biology Society, EMBC?11, pp. 5165-5168, IEEE, 2011
Guillaume AUZIAS, Julien LEFEVRE, Arnaud LE TROTER, RÉGIS Jean, Olivier COULON "Model-driven
Conformal Parameterization of the Cortical Surface" , 17th International Conference on Human Brain Mapping,
Organization for Human Brain Mapping, 2011
Gloria MENEGAZ, Arnaud LE TROTER, Jean-marc BOÏ, Jean SEQUEIRA "Semantic driven resampling of the
USA-UCS" , CCIW 07, Modène (Italie), sep 2007
Arnaud LE TROTER, Rémy BULOT, Jean-marc BOÏ, Jean SEQUEIRA "Arc of ellipse detection for video image
registration" , SiPS, Athènes, Grèce, nov 2005
Hubert RIPOLL, PETIT J-P., Arnaud LE TROTER "The relevance of using realistic simulated environments for the
study of decision making in sport" , 11th World Congress of Sport Psychology, Sydney, 2005
Arnaud LE TROTER, Sébastien MAVROMATIS, Jean-marc BOÏ, Jean SEQUEIRA "Automatic landmark detection
and validation in soccer video sequences" , ICCVG, International Conference on Computer Vision and Graphics
2004
Arnaud LE TROTER, Sébastien MAVROMATIS, Jean SEQUEIRA "Automatic selection of a "region of interest" in
3d scene images: application to video captured scenes" , ACIVS, 2004
Arnaud LE TROTER, Sébastien MAVROMATIS, Jean SEQUEIRA "Soccer field detection in video images using
color and spatial coherence" , in : Springer Verlag, ICIAR, International Conference on Image Analysis and
Recognition, Vol. ICIAR 2004, Vol 2, pp. 265-272, 2004
National Conferences with peer review and proceedings
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Arnaud LE TROTER, Alexandre AMALRIC, Jean-Patrice NOELL, Bruno SERRA "Recalage d’un système multivues pour la texturation automatique de modèles 3D simplifiés, en milieu urbain" , CORESA’09 : COdage et
REprésentation des Signaux Audiovisuels, Toulouse, 2009
Arnaud LE TROTER, Sébastien MAVROMATIS, Jean-marc BOÏ, Jean SEQUEIRA "Segmentation d’images en
plages de couleurs dominantes" , TAIMA’05, Hamamet, Tunisie, sep 2005
Arnaud LE TROTER, Rémy BULOT, Jean-marc BOÏ, Jean SEQUEIRA "Détection d’arcs d’ellipses pour la mise en
correspondance d’images vidéo avec un modèle 3D" , TAIMA’05, Hamamet, Tunisie, sep 2005
Conference abstracts
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Arnaud LE TROTER, Denis RIVIÈRE, Olivier COULON "An Interactive Sulcal Fundi Editor in BrainVisa" , 17th
International Conference on Human Brain Mapping, Organization for Human Brain Mapping, 2011