CV VILLEGER Sebastien 2016_09_04 eng - Sébastien Villéger
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CV VILLEGER Sebastien 2016_09_04 eng - Sébastien Villéger
Villéger Sébastien 2016/04/29 Sébastien VILLÉGER Date of birth: 20th of January 1983 Nationality: French Professional address: Laboratoire Biodiversité marine et ses usages (UMR 9190 MARBEC) Université de Montpellier, cc 093 Place Eugène Bataillon 34095 Montpellier cedex 5 FRANCE Téléphone: +33 (0)4 67 14 47 32 E-mail : sebastien.villeger@cnrsfr Professional website: http://www.umr-marbec.fr/villeger-sebastien.html Personal website: http://villeger.sebastien.free.fr Professional experience October 2012-Present: Researcher at the French CNRS. Laboratoire Biodiversité marine et ses usages, Montpellier. Janvier 2011-September 2012: Postdoctoral researcher, University of Toulouse Topic : Biotic homogenization of freshwater fish faunas (Biodiversity of Freshwater Ecosystems project, UE FP7) Department: Laboratory “Évolution et Diversité Biologique” Scientific adviser: Pr Sébastien Brosse September 2009-Décembre 2010: Postdoctoral researcher, University of Toulouse Topic: Taxonomic homogenization of freshwater fish faunas (Freshwater Fish Diversity project, French ANR) Department: Laboratory “Évolution et Diversité Biologique” Scientific adviser: Pr Sébastien Brosse October 2008-August 2009: Postdoctoral researcher and teaching assistant at the University of Montpellier. Courses taught: Biostatistics Research activity : - Characterization of fish functional niche (in collaboration with Pr David Mouillot, laboratoire “Écosystèmes Lagunaires”, University of Montpellier) - Nutrient cycling by coastal macro-organisms (in collaboration with Pr Mike Vanni, Miami University, Ohio, Etats-Unis) October 2005-August 2008: Teaching assistant in ecology and biostatistics (University of Montpellier). 1 Villéger Sébastien 2016/04/29 Education § 2005-2008: PhD in Evolutionary biology and Ecology (Montpellier SupAgro) Research done at the “Écosystèmes Lagunaires” laboratory (University of Montpellier). Title: “Dynamic of functional diversity of fish communities (Terminos lagoon, Mexico)” Supervisors: Pr David Mouillot (University of Montpellier) and Dr Julia RamosMiranda (University of Campeche, Mexico) Defended on the 8th of December 2008 at Montpelier SupAgro. With highest distinction. § 2004-2005: Master of Sciences in Evolutionary biology and Ecology (Montpellier SupAgro). Rank 4th/20. Thesis: “Relation between plant functional traits and ecosystem properties” Supervisor: Dr Eric Garnier (CEFE, Montpellier) § 2002-2004: Master's degree in Agronomy and Agri-food Sciences (Montpellier SupAgro). Ranks: 1st year: 1st/112 and 2nd year: 6th/118 2004: 3-months voluntary training course at the Edith Cowan University (Perth, Australia) “Evaluation of habitat preference of an abundant seagrass fish species: Stigmatopora argus”. Supervisor: Dr Glenn Hyndes § 2000-2002: University-level preparation for the nation-wide competitive entrance exams of the French "Grandes Écoles". Option “Biology, Chemistry, Physics and Earth Science” Rank for the competitive examination: 66th/1280. § June 2000: “Baccalauréat” (equivalent to A-levels) in Sciences, option “Life and Earth sciences”. With highest distinction. Scientific communications Citation report: http://www.researcherid.com/rid/C-6272-2011 Articles in international peer-reviewed journals * indicates co-first or co-senior authorship underlined names indicate students I (co-)supervised 39. Toussaint A., Beauchard O., Oberdorff T., Brosse S* & Villéger S*. 2016. Worldwide freshwater fish homogenization is driven by a few widespread non-native species. Biological Invasions. 18:1295–1304. 38. Leitão R.P., Zuanon J., Villéger S., Williams S.E., Baraloto C., Fortunel C., Mendonça F. P., Mouillot D. 2016. Rare species contribute disproportionately to the functional structure of species assemblages. Proc. R. Soc. London Ser. B. 283:20160084. 37. Toussaint A., Charpin N., Brosse S* & Villéger S*. 2016. Global functional diversity of freshwater fish is concentrated in the Neotropics while functional vulnerability is widespread. Scientific Reports. 6:22125. 36. Doxa A., Holon F., Deter J., Villéger S., Boissery P., Mouquet N. 2016. Mapping biodiversity in three-dimensions challenges marine conservation strategies: The example 2 Villéger Sébastien 2016/04/29 of coralligenous assemblages in North-Western Mediterranean Sea. Ecological Indicators. 61:1042–1054. 35. Pool T.K., Cucherousset J., Boulêtreau S., Villéger S., Strecker A.L., Grenouillet G. 2016. Increased taxonomic and functional similarity does not increase communities’ trophic similarity. Global Ecology and Biogeography. 25:46–54. 34. Pham The T., Chu Van T., Bui Thi V. H., Nguyen T. T., Tran Q. H., Cung Thi N. M., Bouvier C., Brune J., Villéger S., Bouvier T., Bettarel Y. 2015. Coral-associated viruses and bacteria in the Ha Long bay (Vietnam). Aquatic Microbial Ecology. 76:149–161. 33. Chiarello M., Villéger S., Bouvier C., Bettarel Y. & Bouvier T. 2015. High diversity of skin-associated bacterial communities of marine fishes is promoted by their high variability among body parts, individuals and species. FEMS Microbiology Ecology. 91: 10.1093/femsec/fiv061 32. Sagouis A., Cucherousset J., Villéger S., Santoul F. & Boulêtreau S. 2015. Non-native species modify the isotopic structure of freshwater fish communities across the globe. Ecography. 38:979–985. 31. Cucherousset J. & Villéger S. 2015. Quantifying the multiple facets of isotopic diversity: New metrics for stable isotope ecology. Ecological Indicators. 56: 152–160. 30. Maire E., Grenouillet G., Brosse S. & Villéger S. 2015. How many dimensions to accurately assess functional diversity? A pragmatic approach for assessing the quality of functional spaces. Global Ecology and Biogeography. 24: 728–740. 29. Villéger S., Blanchet S., Beauchard O., Oberdorff T. & Brosse S. 2015. From current distinctiveness to future homogenization of the world’s freshwater fish faunas. Diversity and Distributions. 21: 223–235. 28. Sirot C., Villéger S., Mouillot D., Darnaude A.M., Ramos-Miranda J., Flores-Hernandez D. & Panfili J. 2015. Combinations of biological attributes predict temporal dynamics of fish species in response to environmental changes. Ecological Indicators. 48: 147–156. 27. Zhao T., Villéger S., Lek S. & Cucherousset J. 2014. High intraspecific variability in the functional niche of a predator is associated with ontogenetic shift and individual specialization. Ecology and Evolution. doi:10.1002/ece3.1260 26. Villéger S., Grenouillet G. & Brosse S. 2014. Functional homogenization exceeds taxonomic homogenization among European fish assemblages. Global Ecology and Biogeography. 23: 1450–1460. 25. Pool T.K., Grenouillet G. & Villéger S. 2014. Species contribute differently to the taxonomic, functional, and phylogenetic alpha and beta diversity of freshwater fish communities. Diversity and Distributions. 20: 1235–1244. 24. Mouillot D.*, Villéger S.*, Parravicini V.*, Kulbicki M., Arias-González J.-E., Bender M. Chabanet P., Floeter S.R., Friedlander A.M., Vigliola L. & Bellwood D.R. 2014. Functional over-redundancy and high functional vulnerability in global fish faunas on tropical reefs. Proceedings of the National Academy of Sciences USA. 111: 13757–13762. 23. Parravicini V., Villéger S., McClanahan T.R., Arias-González J.-E., Bellwood D.R., Belmaker J., Chabanet P., Floeter S.R., Friedlander A.M., Guilhaumon F., Vigliola L., Kulbicki M. & Mouillot D. 2014. Global mismatch between species richness and vulnerability of reef fish assemblages. Ecology Letters. 17: 1101–1110. 22. Cheng L., Blanchet S., Loot G., Villéger S., Zhang T., Lek S, Ang-Lek S. & Li Z. 2014. Temporal changes in the taxonomic and functional diversity of fish communities in shallow Chinese lakes: the effects of river-lake connections and aquaculture. Aquatic Conservation: Marine and Freshwater Ecosystems. 24:23-34. 21. Toussaint A., Beauchard O., Oberdorff T., Brosse S & Villéger S. Historical assemblage distinctiveness and the introduction of widespread non-native species explain worldwide 3 Villéger Sébastien 2016/04/29 change in freshwater fish taxonomic dissimilarity. Global Ecology and Biogeography. 23:574-584. 20. Villéger S., Grenouillet G. & Brosse S. 2013. Decomposing functional β-diversity reveals that low functional β-diversity is driven by low functional turnover in European fish assemblages. Global Ecology and Biogeography 22:671-681. 19. Mouillot D., Graham N.A.J., Villéger S., Mason N.W.H. & Bellwood D.R. 2013. A functional approach reveals community responses to disturbances. Trends in Ecology and Evolution. 28:167-177. 18. Buisson L., Grenouillet G., Villéger S., Canal J. & Laffaille P. 2013. Toward a loss of functional diversity in stream fish assemblages under climate change. Global Change Biology. 19:387-400. 17. Brosse S., Beauchard O., Blanchet S., Dürr H.H, Grenouillet G, Hugueny B., Lauzeral C., Leprieur F., Tedesco P.A., Villéger S. & Oberdorff T. 2013. Fish-SPRICH: a database of freshwater fish species richness throughout the World. Hydrobiologia. 700:343-349. 16. Villéger S., Grenouillet G., Suc V. & Brosse S. 2012. Intra- and interspecific differences in nutrient recycling by European freshwater fish. Freshwater Biology. 57:2330-2341. 15. Villéger S., Ramos Miranda J., Flores Hernandez D. & Mouillot D. 2012. Low functional β-diversity despite high taxonomic β-diversity among tropical estuarine fish communities. PLoS One. 7:e40679. 14. Villéger S., Ferraton F., De Wit R. & Mouillot D. 2012. Nutrient recycling by coastal macro-organisms: intra- vs. interspecific differences. Marine Ecology-Progress Series. 452:297-303. 13. Villéger S. & Brosse S. 2012. Measuring changes in taxonomic dissimilarity following species introductions and extirpations. Ecological Indicators. 18:552-558. 12. Villéger S., Blanchet S., Beauchard O., Oberdorff T. & Brosse S. 2011. Homogenization patterns of the world's freshwater fish faunas. Proceedings of the National Academy of Sciences USA. 108:18003-18008. 11. Bouletreau S., Cucherousset J., Villéger S. & Santoul F. 2011. Colossal aggregations of giant alien freshwater fish as a potential biogeochemical hotpsot. PLoS One. 6:e25732. 10. Albouy C., Guilhaumon F., Villéger S., Mouchet M., Mercier L., Culioli J. M., Tomasini J. A., Le Loc’h F. & Mouillot D. 2011. Predicting trophic guild and diet overlap from functional traits: statistics, opportunities and limitations for marine ecology. Marine Ecology Progress Series. 436:17-28. 9. Villéger S., Novack-Gottshal P. & Mouillot D. 2011. The multidimensionality of the niche reveals functional diversity changes in benthic marine biotas across geological time. Ecology Letters. 14:561-568. 8. Mouillot D., Villéger S., Scherer-Lorenzen M. & Mason N.W.H. 2011. Functional structure of biological communities predicts ecosystem multifunctionality. PloS One. 6:e17476. 7. Mouchet M., Villéger S., Mason N.W.H. & Mouillot D. 2010. Functional diversity estimators: an overview of their redundancy and their ability to discriminate community assembly rules. Functional Ecology. 24:867-876. 6. Villéger S., Ramos Miranda J., Flores Hernandez D. & Mouillot D. 2010. Contrasting changes in taxonomic vs functional diversity of tropical fish assemblages after habitat degradation. Ecological Applications. 20:1512-1522. 5. Devictor V., Clavel J., Julliard R., Lavergne S., Mouillot D., Thuiller W., Venail P., Villéger S. & Mouquet N. 2010. Defining and measuring ecological specialization. Journal of Applied Ecology. 47:15-25. 4. Villéger S. & Mouillot D. 2008. Additive partitioning of diversity including species differences: a comment on Hardy & Senterre (2007). Journal of Ecology. 96:845-848. 4 Villéger Sébastien 2016/04/29 3. Villéger S., Mason N.W.H. & Mouillot D. 2008. New multidimensional functional diversity indices for a multifaceted framework in functional ecology. Ecology. 89:22902301. 2. Villéger S., Ramos Miranda J., Flores Hernandez D., Sosa López A. & Mouillot D. 2008. Stable trophic structure across coastal nekton assemblages despite high species turnover. Marine Ecology Progress Series. 364:135-146. 1. Mouchet M., Guilhaumon F., Villéger S., Mason N.W.H., Tomasini J.A. & Mouillot D. 2008. Towards a consensus for calculating dendrogram-based functional diversity indices. Oikos. 117:794-800. Book chapter Hobbie S. E. & Villéger S. 2015. Interactive effects of plants, decomposers, herbivores, and predators on nutrient cycling, in Trophic Ecology: Bottom-up and Top-down Interactions across Aquatic and Terrestrial Systems. Editors: Hanley T.C. & La Pierre, K.J. Cambridge University press, Cambridge, UK. ISBN: 9781107077324. p233-259. Package for R software Baselga A., Orme D., Villéger S., De Bortoli J. & Leprieur F. Betapart : Partitioning beta diversity into turnover and nestedness components. Version 1.3. Oral presentations Leruste A., Villéger S., Malet N., de Wit R., Bec B. (2016). Multidimensional functional diversity indices improve understanding of phytoplankton ecology in coastal lagoons. 7th European Coastal Lagoon Symposium (Eurolag), Murcia (Spain), March 2016. Vasconcelos R.P., Henriques S., Amoroso S., França S., Pasquaud S., Cabral H.N., Villéger S. & Guilhaumon F. Functional diversity of fish in estuaries at a global extent. XV European Congress of Ichthyology, Porto (Portugal), September 2015. Villéger S., Andrello M., Parravicini V. & Mouillot D. Spatial insurance of fish functional diversity across coral reefs. International Biogeography Society 7th biennial meeting. Bayreuth (Germany), January 2015. Villéger S. Functional diversity of coral reef fishes. Public conference at the University of Tel Aviv (Israel), December 2014. Zhao T., Villéger S., & Cucherousset J. Non-native species disturb functional diversity patterns of lake fish communities. 8th Shallow Lakes Conference, Antalya (Turkey), October 2014. Villéger S., Argenty, J., Bouvier, C., Carré, C. & Bouvier, T. Nutrient recycling by marine fishes affects abundance and diversity of bacterio- and phytoplankton. Invited talk for Joint Aquatic Science Meeting. Portland (USA), May 2014. Cucherousset J., Boulêtreau S., Villéger S. & Santoul F. Patterns of trophic diversity in freshwater fish communities: a stable isotope meta-analysis. 8th International Conference on Applications of Stable Isotope Techniques to Ecological Studies, Brest (France), August 2012. Villéger S., Ramos Miranda J., Flores Hernandez D. & Mouillot D. Loss of functional diversity after habitat degradation. 4th European Conference on Coastal Lagoon Research, Montpellier (France), December 2009. 5 Villéger Sébastien 2016/04/29 Villéger S., Ramos Miranda J., Flores Hernandez D. & Mouillot D. Core functional groups maintain low functional β-diversity. 93rd Annual Congress of the Ecological Society of America, Milwaukee (USA), August 2008. Villéger S., Mason N. W.H. & Mouillot D. Vers une approche fonctionnelle de l’écologie des communautés. 10èmes Journées d’Écologie fonctionnelle, La Grande Motte (France), April 2008. Villéger S., Ramos Miranda J., Flores Hernandez D., Sosa López A. & Mouillot D. New indices of functional diversity based on biomass distribution along trophic levels. International Congress on Coastal Ecosystems, Campeche (Mexico), June 2006. Poster Keil P, Gotelli, N.J., Givan O., Villéger S., Parravicini V., Belmaker J. & GASPAR team. Scaling of biodiversity loss in global reef fishes: endemics-area relationships and beyond. EU Macro 2015 meeting. Copenhague (Denmark),June 2015. Toussaint A., Charpin N., Villéger S & Brosse S. Taxonomic and functional diversity of freshwater fish across the world. International Biogeography Society 7th biennial meeting. Bayreuth (Germany), January 2015. Mouchet M., Guilhaumon F., Villéger S., Mason N.W.H., Tomasini J.A. & Mouillot D. Vers un dendrogramme consensus pour la quantification de la diversité fonctionnelle d’une communauté. 10èmes Journées d’Écologie fonctionnelle, La Grande Motte (France), April 2008. Scientific activities Leader of research projects - 2015-2017: Microbes associated to macroorganisms in coral reefs: A missing and vulnerable biodiversity hot-spot ? Co-leader. 100k€ funded by “Fondation Total”. - 2015-2016: Variability and drivers of nutrient recycling by coastal fish communities. Leader. 23k€ funded by CNRS. - 2015: Microbiome of cetaceans. Co-leadership. 6k€ funded by “Fondation Marineland”. - 2013. Effects of nutrient excretion by fish on abundance and diversity of plankton. Internal funding from the “Écosystèmes Marins Côtiers” laboratory. Co-leadership. - 2009. Nutrient cycling by coastal macro-organisms. Internal funding from the “Écosystèmes Lagunaires” laboratory. Co-leadership. Participation to research projects - 2016 : Relationship between biodiversity and aesthetic value of coral reefs. Funded by CNRS (10k€). Leader Nicolas Mouquet. - 2015 : Ecosystem services provided by mangroves. Funded by CNRS (10k€). Leader Jacques Panfili. - 2015 : Do mangroves benefit to coral reef fishes in the Indo-Pacific? Funded by CNRS (10k€). Leader Michel Kulbicki. - 2015-2016 : Biodiversity of Geyser, Zélée and Iris reefs. Funded by the French “TAAF” (250k€). Leader Thomas Claverie. - 2012-2013 : “GASPAR” consortium on biogeography of coral reef fishes. Funded by French Foundation for Research on Biodiversity (FRB). Leader Michel Kulbicki. 6 Villéger Sébastien 2016/04/29 - 2010-2013. Long-term effects of environmental changes on nectonic biodiversity and tropical estuaries functioning. French National Research Agency. Leader David Mouillot. - 2011-2012: Biodiversity of Freshwater Ecosystems: Status, Trends, Pressures, and Conservation Priorities (BioFresh). European Union Project (FP7). Leader Klement Tockner. - 2009-2010. Freshwater Fish Diversity. French National Research Agency. Leader Thierry Oberdorff. - 2006-2008. Use of the Terminos lagoon by fishes from the Gulf of Mexico. French CNRS. Leader David Mouillot. Invited talks - PlankDiv - EuroMarine Foresight workshop. Villefranche sur mer (France), March 2016. Assessing the complementary facets of functional diversity. - LabEx CEMEB, Montpellier (France). Février 2013. Homogénéisation taxonomique et fonctionnelle des faunes de poissons d’eau douce. - Laboratoire Evolution et Diversité Biologique, Toulouse (France). September 2011. Homogénéisation taxonomique et fonctionnelle des faunes de poissons d’eau douce. - Station d'Ecologie Expérimentale du CNRS, Moulis (France). June 2010. Dynamique de la diversité fonctionnelle des communautés de poissons de la lagune de Terminos. - Laboratoire d’Écologie Fonctionnelle (ECOLAB), Toulouse (France). November 2009. Dynamique de la diversité fonctionnelle des communautés de poissons de la lagune de Terminos. - Centre de Ressources Halieutiques, Sète (France). November 2008. Dynamique de la diversité fonctionnelle des communautés de poissons de la lagune de Terminos (Mexique). - Centro Interdisciplinario de Ciencias Marinas, La Paz (Mexico). Mars 2008. Towards a functional approach of fish communities. - Universidade Federal de Rio Grande do Sul (Brazil). November 2007. Stable trophic structure across coastal nekton assemblages despite high species turnover. Peer-reviewing Biological Invasions ; Biology Letters ; Ecology ; Ecology Letters ; Ecology of Freshwater Fish; Ecosystems ; Environmental Biology of Fishes ; Estuaries and Coasts ; Fisheries Bulletin ; Functional Ecology ; Global Ecology and Biogeography ; Journal of Animal Ecology ; Journal of Applied Ecology ; Journal of Vegetation Science ; ICES Journal of Marine Science ; Methods in Ecology and Evolution ; Oecologia ; Oikos ; PLoS One PhD Defense committee Laure Zupan, Université Josepgh Fourrier, Grenoble (France), Juin 2014. Cayetano Gutierrez-Canovas, Université de Murcia (Espagne), Novembre 2014. Participation to PhD advisory committee Edson Flores Ramos, El Colegio de la Frontera Sur (Mexico), 2016. Kévin Cilléros, Université de Toulouse (France), 2015. Lucie Kuczynski, Université de Toulouse (France), 2015. Florian Holon, Université de Montpellier (France), 2015. Tian Zhao, Université de Toulouse (France), 2012-2013. Fernando Cordova Tapia, Universidad Nacional Autónoma de México (Mexico), 2013. 7 Villéger Sébastien 2016/04/29 Scientific Animation Co-animator of the MARBEC lab research theme « Micro-organisms and interactions with macro-organisms » (2015-présent). Co-organizer of MARBEC lab seminars (2015-présent). Co-organizer of a 2-days workshop on animal microbiome funded by LabEx CEMEB (October 2015). Supervision Co-advisor of PhD candidates Marlène Chiarello, 2014-2017. Skin microbiome of marine organisms. Silvain Louis, 2014- 2017. Robotic for marine ecology. Aurèle Toussaint, 2012-2016. Functional diversity of the world freshwater fish faunas. Collaboration with PhD candidates Tian Zhao, Doctorant, Université Paul Sabatier, Toulouse (France). 2011-2015. Luisa Manna, Université d’état de Rio de Janeiro (Brazil). 2012-2015. Rafael Leitão, Université Fédérale de Rio de Janeiro (Brazil). 2012-2015 Nicole Colin, Université de Barcelona (Spain). 2012-2016. Research assistants Fabien Rieuvilleneuve: permanent lab assistant specialized in molecular biology and fish biology. Sébastien Villon, computer engineer, October 2015-September 2016, specialized in deeplearning algorithm. Nicolas Charpin, research assistant, September 2011- December 2012, specialized in fish morphometric. Bachelor and Master students Mathias Dumazer, Bachelor. June-July 2015. Identification of coral reef fishes on videos. Sébastien Villon, Master. January-June 2015. Automated recognition of marine organisms. Maud Marty, Master 1. April-July 2015. Effect of human activities on biodiversity of coral reef fishes. Marlène Chiarello, Master. January-June 2014. Biodiversity of marine fish skin microbiome Camille Richon, Master. June-July 2013. Overlap in functional traits vs environmental niche among tropical estuarine fishes Eva Maire, Master. January-June 2013. Assessing quality of functional spaces Aurèle Toussaint, Master. January-June 2012. Determinants of changes in taxonomic similarity of freshwater fish faunas. Simon Potier, Master. April-June 2011. Indirect impact of predation on ecosystems Mathieu Trouvé, Master. April-June 2011. Indirect impact of predation on ecosystems Camille Chastagnol, Bachelor. June-July 2010. Nutrient excretion by riverine fish. Julie Canal, Master. February-May 2010. Nutrient excretion by freshwater fish, Nicolas Loiseau, Bachelor. June 2008. Functional approach of locomotion in marine fish. Sahar Mejri, Master (Tunisia). June 2008. Environmental and functional niche of Terminos lagoon fish. David Ravard, Master. March-June 2008. Functional specialization of fish assemblages in the Terminos lagoon. Laure-Anne Gutierrez, Master. March-June 2007. Functional diversity of lagoon fish faunas. 8 Villéger Sébastien 2016/04/29 Maud Mouchet, Master. January-June 2007. Typology of functional diversity indices. Laure-Anne Gutierrez, Bachelor. July 2006. Picture-based measures of fish functional traits Maud Mouchet, Master. March-June 2006. Functional classification of fish based on morphological attributes. Teaching experience Since 2005, I have taught for more than 250h in Ecology and Biostatistics to Bachelor and Master students at the University of Montpellier and University of Mayotte. Languages - French: mother tongue - English: fluent - Spanish: good understanding - German: basic knowledge Skills - Statistical analysis, modeling, programming and graphics on R - Experiments on fishes - Macrophotography and Image processing (ImageJ) - Basics knowledge in GIS (ArcView, ArcGIS) - Driving license - Diving (Level 1 CMAS) 9
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